New shorter, tighter, more interesting and all around better CoGe-MaizeGDB walkthrough.
Posts Tagged ‘CoGe’
Why to Celebrate the Publication of the Brachypodium Genome
Goes into four answers to why we should celebrate the publication of the genome of the fourth grass ever sequenced (sometimes referred to either affectionately or derisively as the Arabidopsis of the plant world), along with some pretty pictures of the plant itself and a little basic genome analysis.
MaizeGDB and CoGe: A Beautiful Friendship
Editor’s note: I have a new shorter, better, tutorial, here. One of the earliest fruits of my work to define relationships between syntenic genes* was a list of sorghum genes and corn genes in one or both of the two related regions of the corn genome (each region in sorghum corresponds to two in corn [...]
Figure from my Research Proposal
Using the one figure I was able to put into my NSF fellowship research proposal I explain a bit about orthology and genome duplications. But more importantly it’s cool looking, and I’ve got a link back to the comparative genomics tool I used to create it so anyone who is interested play around with CoGe.